STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV30194-hydroxybenzoyl CoA thioesterase. (142 aa)    
Predicted Functional Partners:
BAV3020
2-aminobenzoate-CoA ligase.
 
  
 0.940
BAV3018
Putative endoribonuclease.
 
     0.932
BAV3024
2-amninobenzoyl-CoA monooxygenase/reductase.
 
  
 0.918
ubiC
Putative lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.
    
 0.917
ubiA
Putative 4-hydroxybenzoate--polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
     
 0.916
BAV3022
Putative enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.915
BAV3021
acyl-CoA dehydrogenase.
 
   
 0.874
BAV3034
MarR-family transcriptional regulator.
 
     0.792
BAV3023
D-beta-hydroxybutyrate dehydrogenase (short chain dehydrogenase/reductase); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 
 0.790
BAV0226
acyl-CoA dehydrogenase.
 
   
 0.607
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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