STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3028Putative sensor kinase. (662 aa)    
Predicted Functional Partners:
BAV3027
Conserved hypothetical protein.
 
  
 0.973
BAV3026
Conserved hypothetical protein.
 
    0.958
flgJ
Peptidoglycan hydrolase.
   
    0.948
wlbJK
Putative membrane protein.
  
  
 0.822
fliM
Flagellar motor switch protein.
  
    0.782
BAV3025
Putative signaling protein.
  
 0.771
fliG
Flagellar motor switch protein.
  
    0.768
flgB
Flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.753
fliH
Flagellar assembly protein.
 
    0.714
bvgS
Virulence sensor protein; Start codon not provided.
  
  
 0.705
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.