STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BAV3043Multidrug efflux system inner membrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (411 aa)    
Predicted Functional Partners:
BAV3041
Multidrug efflux system transmembrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.978
BAV3042
Multidrug efflux system transmembrane protein; Start codon not provided; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.978
BAV3040
Multidrug efflux system outer membrane protein.
 
 
 0.964
macB
Putative macrolide-specific ABC-type efflux carrier; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.906
BAV0325
Multidrug efflux system transmembrane protein.
 
 
 0.822
BAV2461
Multidrug efflux system transmembrane protein.
 
 
 0.791
acrB
Acriflavine resistance protein B (multidrug efflux system transmembrane protein).
 
 
 0.787
BAV0324
Multidrug efflux system outer membrane protein.
 
 
 0.763
BAV3046
Type 4 prepilin-like protein leader peptide processing enzyme; Belongs to the peptidase A24 family.
  
    0.756
BAV1946
Outer membrane protein.
 
 0.737
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.