STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3062Putative oxidoreductase; Also similar to BAV2981 (48.1 38d.). (1206 aa)    
Predicted Functional Partners:
BAV2981
Putative oxidoreductase; Also similar to BAV3062 (48.1 38d.).
 
 
0.866
fumA
Putative fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.693
BAV2976
Putative acetyltransferase.
 
 
 
 0.683
BAV2367
Probable hydroxylase.
  
  
 0.585
paaK
Phenylacetate-coenzyme A ligase.
 
  
 0.582
BAV3254
Putative reductase flavoprotein subunit; Also similar to BAV0956 (29.2 38d); Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.577
BAV0703
Putative exported protein.
  
 
 0.562
sdhA
Succinate dehydrogenase flavoprotein subunit; Start codon not provided; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.562
BAV3258
Putative dehydrogenase; Similarity to kstd2 is limited to the C-terminus.
  
 
 0.562
BAV3264
Putative dehydrogenase; Start codon not provided.
  
 
 0.562
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.