STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
Experiments
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[Homology]
Score
BAV3077Putative exopolysaccharide biosynthesis aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (383 aa)    
Predicted Functional Partners:
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
  
  
 0.914
BAV3078
Putative exopolysaccharide biosynthesis glycosyl transferase.
  
 0.901
BAV3081
Putative glycosyl transferase.
 
   0.884
wlbL
Putative sugar epimerase/dehydratase.
 
  
 0.850
BAV3084
Putative 3-oxoacyl-[acyl-carrier-protein] synthase; Start codon not provided.
 
 
 
 0.818
BAV3079
Putative O-acyltransferase.
 
   
 0.812
BAV3086
Putative O-antigen export ABC transporter,ATP-binding protein.
     
 0.793
BAV3087
Putative O-antigen export ABC transporter,putative permease protein.
     
 0.790
BAV3085
Acyl carrier protein; Start codon not provided.
  
 
 0.788
BAV3080
Putative dioxygenase.
       0.780
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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