STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3077Putative exopolysaccharide biosynthesis aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (383 aa)    
Predicted Functional Partners:
BAV2636
Capsular polysaccharide biosynthesis glucosyltransferase.
 
  
 0.926
BAV3078
Putative exopolysaccharide biosynthesis glycosyl transferase.
  
 0.901
BAV3081
Putative glycosyl transferase.
 
 
 0.887
wlbL
Putative sugar epimerase/dehydratase.
 
  
 0.849
BAV3084
Putative 3-oxoacyl-[acyl-carrier-protein] synthase; Start codon not provided.
 
 
   0.820
BAV3079
Putative O-acyltransferase.
 
   
 0.811
BAV3082
Putative short-chain dehydrogenase/reductase.
  
    0.796
BAV3085
Acyl carrier protein; Start codon not provided.
  
   0.792
BAV3086
Putative O-antigen export ABC transporter,ATP-binding protein.
     
 0.790
BAV3083
Putative short-chain dehydrogenase/reductase.
  
    0.788
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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