STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phoRPhosphate regulon two-component system sensor kinase. (440 aa)    
Predicted Functional Partners:
phoB
Phosphate regulon two-component response regulator.
 0.998
wlbJK
Putative membrane protein.
  
 
 0.891
ompR
Osmolarity two component response regulator.
 
 
 0.819
risA
Two component system response regulator.
 
 
 0.773
kdpE
Two component response regulator.
 
 
 0.773
bvgS
Virulence sensor protein; Start codon not provided.
 
 
 
0.769
BAV2117
Two-component response regulator.
 
 
 0.751
BAV0523
Two-component system response regulator.
 
 
 0.744
BAV0099
Two-component response regulator.
 
 
 0.737
BAV0018
Probable two-component response regulator.
 
 
 0.736
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.