STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ilvAThreonine dehydratase biosynthetic; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (502 aa)    
Predicted Functional Partners:
ilvH
Acetolactate synthase isozyme III small subunit.
 
 0.951
BAV0899
Putative decarboxylase.
  
 0.948
ilvI1
Acetolactate synthase isozyme III large subunit; Also similar to BAV3387 (46.528 38d).
  
 0.948
ilvB
Acetolactate synthase isozyme I large subunit; Also similar to BAV1880 (52.585 38d.); Belongs to the TPP enzyme family.
  
 0.947
ilvG
Acetolactate synthase synthase isozyme II large subunit; Also similar to BAV0902 (52.585 38d.); Belongs to the TPP enzyme family.
  
 0.947
thrC
Threonine synthase.
  
 
 0.939
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.933
ilvI2
Acetolactate synthase isozyme III large subunit; Also similar to BAV2673 (46.528 38d).
  
 0.932
trpB
Tryptophan synthase beta chain; Start codon not provided.
  
 0.929
BAV0961
Putative acetolactate synthase large subunit; Start codon not provided; Belongs to the TPP enzyme family.
  
 0.925
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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