STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydA2Cytochrome D ubiquinol oxidase subunit I; Also similar to BAV0991 (54.6 38d.). (525 aa)    
Predicted Functional Partners:
cydB2
Cytochrome D ubiquinol oxidase subunit II; Also similar to BAV0992 (44.3 38d 0d.).
 
 0.993
cydB1
Cytochrome d ubiquinol oxidase subunit II; Also similar to BAV3110 (44.3 38d.).
 
 
 0.947
cydD
ABC transporter, ATP-binding protein; Start codon not provided.
 
  
 0.934
BAV2786
Putative cytochrome bd ubiquinol oxidase,subunit I.
  
  
 
0.928
BAV2785
Putative cytochrome oxidase D ubiquinol oxidase,subunit II.
 
 
 0.917
cydA1
Cytochrome D ubiquinol oxidase subunit I; Start codon not provided; Also similar to BAV3111 (54.6 38d.).
  
  
 
0.903
cydC
ABC transporter, ATP-binding protein.
 
  
 0.858
BAV3109
Putative exported protein.
 
 
 0.760
BAV3112
Conserved hypothetical protein; Start codon not provided.
  
  
 0.686
purT
Phosphoribosylglycinamide formyltransferase 2; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.
  
  
 0.496
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.