Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BAV1541 | BAV2217 | BAV1541 | BAV2217 | Putative competence protein. | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | 0.714 |
| BAV1541 | ada | BAV1541 | BAV3120 | Putative competence protein. | Ada regulatory protein (methylated-dna--protein-cysteine methyltransferase); Similar over its C-terminal region to BAV2217 (45.399 38d.). | 0.714 |
| BAV1541 | recA | BAV1541 | BAV2309 | Putative competence protein. | RecA protein (recombinase A); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.655 |
| BAV1541 | rpoD | BAV1541 | BAV2329 | Putative competence protein. | RNA polymerase sigma factor 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.466 |
| BAV1541 | rpoH | BAV1541 | BAV3285 | Putative competence protein. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.466 |
| BAV2215 | BAV2217 | BAV2215 | BAV2217 | DNA-3-methyladenine glycosylase. | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | 0.894 |
| BAV2215 | ada | BAV2215 | BAV3120 | DNA-3-methyladenine glycosylase. | Ada regulatory protein (methylated-dna--protein-cysteine methyltransferase); Similar over its C-terminal region to BAV2217 (45.399 38d.). | 0.550 |
| BAV2215 | alkA | BAV2215 | BAV2561 | DNA-3-methyladenine glycosylase. | DNA-3-methyladenine glycosylase. | 0.917 |
| BAV2215 | polA | BAV2215 | BAV2388 | DNA-3-methyladenine glycosylase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.617 |
| BAV2217 | BAV1541 | BAV2217 | BAV1541 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | Putative competence protein. | 0.714 |
| BAV2217 | BAV2215 | BAV2217 | BAV2215 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | DNA-3-methyladenine glycosylase. | 0.894 |
| BAV2217 | BAV2249 | BAV2217 | BAV2249 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | Putative DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. | 0.548 |
| BAV2217 | ada | BAV2217 | BAV3120 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | Ada regulatory protein (methylated-dna--protein-cysteine methyltransferase); Similar over its C-terminal region to BAV2217 (45.399 38d.). | 0.774 |
| BAV2217 | alkA | BAV2217 | BAV2561 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | DNA-3-methyladenine glycosylase. | 0.550 |
| BAV2217 | alkB | BAV2217 | BAV3121 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | Alkylated DNA repair protein. | 0.639 |
| BAV2217 | polA | BAV2217 | BAV2388 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.713 |
| BAV2217 | recA | BAV2217 | BAV2309 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | RecA protein (recombinase A); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.589 |
| BAV2217 | rpoD | BAV2217 | BAV2329 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | RNA polymerase sigma factor 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.714 |
| BAV2217 | rpoH | BAV2217 | BAV3285 | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.714 |
| BAV2249 | BAV2217 | BAV2249 | BAV2217 | Putative DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family. | Putative methylated-DNA--protein-cysteine methyltransferase; Similar to the C-terminal region of Escherichia coli AdA regulatory protein; similar to the C-terminal region of BAV3120, Ada,(45.399 38d.). | 0.548 |
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