STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3126Putative monooxygenase. (518 aa)    
Predicted Functional Partners:
BAV0531
Putative oxygenase; Start codon not provided.
  
  
 
0.911
BAV0532
Putative cyclase.
 
  
 0.825
BAV3129
MarR-family transcriptional regulator.
 
  
 0.799
BAV0530
Conserved hypothetical protein.
 
    0.796
BAV3127
Hypothetical protein; No significant database matches.
       0.773
BAV3128
Putative exported protein.
  
    0.662
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
  
 0.603
BAV3139
Putative membrane protein.
  
 
 0.480
nagL
Maleylpyruvate isomerase (glutathione S-transferase).
 
   
 0.434
maaI
Maleylacetoacetate isomerase (glutathione-S-transferase).
 
   
 0.432
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.