STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3137Putative exported protein. (332 aa)    
Predicted Functional Partners:
BAV3139
Putative membrane protein.
 
     0.950
BAV3138
Putative exported polysaccharide deacetylase.
 
     0.946
BAV2896
Cytochrome C.
  
  
 0.715
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
 
 
 0.637
BAV3403
Putative dehydrogenase, cytochrome C subunit.
 
 
 0.613
BAV3247
Putative cytochrome C subunit of gluconate dehydrogenase.
 
 
 0.610
adhB
Alcohol dehydrogenase cytochrome c subunit.
 
 
 0.606
BAV0292
Putative metallo-phosphoesterase.
  
     0.590
BAV1225
Putative exported protein.
   
   0.572
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.527
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.