Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fdhE | fdnG | BAV3146 | BAV3142 | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | 0.933 |
| fdhE | fdnH | BAV3146 | BAV3144 | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | Nformate dehydrogenase, iron-sulfur subunit. | 0.960 |
| fdhE | fdnI | BAV3146 | BAV3145 | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | Formate dehydrogenase, cytochrome b556. | 0.976 |
| fdhE | selA | BAV3146 | BAV3147 | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | selenocysteinyl-tRNA(SeC) synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | 0.956 |
| fdhE | selB | BAV3146 | BAV3148 | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | Selenocysteine-specific elongation factor. | 0.958 |
| fdnG | fdhE | BAV3142 | BAV3146 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | 0.933 |
| fdnG | fdnH | BAV3142 | BAV3144 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | Nformate dehydrogenase, iron-sulfur subunit. | 0.999 |
| fdnG | fdnI | BAV3142 | BAV3145 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | Formate dehydrogenase, cytochrome b556. | 0.998 |
| fdnG | fdsA | BAV3142 | BAV0816 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | NAD-dependent formate dehydrogenase alpha subunit. | 0.922 |
| fdnG | fdsB | BAV3142 | BAV0817 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | NAD-dependent formate dehydrogenase beta subunit. | 0.911 |
| fdnG | fdsD | BAV3142 | BAV0814 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | NAD-dependent formate dehydrogenase delta subunit. | 0.906 |
| fdnG | fdsG | BAV3142 | BAV0818 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | NAD-dependent formate dehydrogenase gamma subunit. | 0.911 |
| fdnG | fmdA | BAV3142 | BAV2261 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | Formamidase. | 0.903 |
| fdnG | selA | BAV3142 | BAV3147 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | selenocysteinyl-tRNA(SeC) synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. | 0.906 |
| fdnG | selB | BAV3142 | BAV3148 | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | Selenocysteine-specific elongation factor. | 0.905 |
| fdnH | fdhE | BAV3144 | BAV3146 | Nformate dehydrogenase, iron-sulfur subunit. | Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | 0.960 |
| fdnH | fdnG | BAV3144 | BAV3142 | Nformate dehydrogenase, iron-sulfur subunit. | Formate dehydrogenase, major subunit; The active-site selenocysteine, residue 197, is encoded by an opal stop codon. | 0.999 |
| fdnH | fdnI | BAV3144 | BAV3145 | Nformate dehydrogenase, iron-sulfur subunit. | Formate dehydrogenase, cytochrome b556. | 0.999 |
| fdnH | fdsA | BAV3144 | BAV0816 | Nformate dehydrogenase, iron-sulfur subunit. | NAD-dependent formate dehydrogenase alpha subunit. | 0.977 |
| fdnH | fdsB | BAV3144 | BAV0817 | Nformate dehydrogenase, iron-sulfur subunit. | NAD-dependent formate dehydrogenase beta subunit. | 0.906 |
page 1 of 4