selB protein (Bordetella avium) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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Score

selB

Selenocysteine-specific elongation factor. (636 aa)

Predicted Functional Partners:

selA

0.981

rpsC

0.962

fdhE

0.961

rpsE

0.952

rpsQ

0.950

rpsL

0.949

rpsB

0.948

rpsG

0.947

rpsO

0.944

rpsJ

0.943

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
fdhE	selA	BAV3146	BAV3147	Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.	selenocysteinyl-tRNA(SeC) synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.	0.959
fdhE	selB	BAV3146	BAV3148	Formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.	Selenocysteine-specific elongation factor.	0.961
rpsB	rpsC	BAV1734	BAV0031	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rpsB	rpsE	BAV1734	BAV0051	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.997
rpsB	rpsG	BAV1734	BAV0021	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.998
rpsB	rpsJ	BAV1734	BAV0024	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.996
rpsB	rpsL	BAV1734	BAV0020	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.998
rpsB	rpsO	BAV1734	BAV2668	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.998
rpsB	rpsQ	BAV1734	BAV0034	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
rpsB	selB	BAV1734	BAV3148	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Selenocysteine-specific elongation factor.	0.948
rpsC	rpsB	BAV0031	BAV1734	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.998
rpsC	rpsE	BAV0031	BAV0051	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	0.998
rpsC	rpsG	BAV0031	BAV0021	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.998
rpsC	rpsJ	BAV0031	BAV0024	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
rpsC	rpsL	BAV0031	BAV0020	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy.	0.998
rpsC	rpsO	BAV0031	BAV2668	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.	0.997
rpsC	rpsQ	BAV0031	BAV0034	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpsC	selB	BAV0031	BAV3148	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Selenocysteine-specific elongation factor.	0.962
rpsE	rpsB	BAV0051	BAV1734	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
rpsE	rpsC	BAV0051	BAV0031	30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy; Belongs to the universal ribosomal protein uS5 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998