STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3184Putative universal stress protein. (284 aa)    
Predicted Functional Partners:
BAV3183
Putative membrane protein.
  
    0.549
bvgS
Virulence sensor protein; Start codon not provided.
 
 
 0.536
BAV2920
Putative universal stress protein.
  
     0.511
brkB
BrkB; Serum resistance protein.
   
  
 0.478
arsC-2
Arsenate reductase.
   
  
 0.471
wlbJK
Putative membrane protein.
  
  
 0.452
ogt
methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.
  
    0.448
BAV2250
Putative arsenate reductase; Belongs to the ArsC family.
   
  
 0.431
arsC
Arsenate reductase.
   
  
 0.426
cadA
Cadmium-transporting ATPase.
     
 0.420
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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