STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
BAV3199Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)    
Predicted Functional Partners:
BAV0974
enoyl-CoA hydratase/isomerase family protein.
 
   0.830
dcaH
hydroxyacyl-CoA dehydrogenase.
 
 0.755
wlbJK
Putative membrane protein.
  
 0.687
BAV3370
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.678
bvgS
Virulence sensor protein; Start codon not provided.
   
 0.664
paaJ
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.637
BAV2476
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.637
BAV2554
Putative beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.637
paaA
Phenylacetic acid degradation protein.
  
  
 0.629
paaD
Phenylacetic acid degradation protein; Start codon not provided.
  
  
 0.612
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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