STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3202ABC transporter, substrate-binding protein. (541 aa)    
Predicted Functional Partners:
BAV3203
ABC transporter, permease protein; Start codon not provided.
 
   0.893
BAV3204
ABC transporter, permease protein.
 
   0.882
BAV1562
ABC transporter, permease protein.
 
   0.834
BAV1563
ABC transporter, permease protein.
 
   0.834
BAV3338
ABC transporter, permease protein.
 
   0.826
BAV3339
ABC transporter, permease protein.
 
   0.816
BAV2803
ABC transporter, permease protein.
 
   0.815
BAV2802
ABC transporter permease protein.
 
   0.799
BAV3205
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   0.657
BAV3206
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   0.648
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.