STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mltAMembrane-bound lytic murein transglycosylase. (426 aa)    
Predicted Functional Partners:
visC
Putative monooxygenase; Also similar to BAV2773 (29.3 38d).
       0.874
apaG
Conserved hypothetical protein.
     
 0.788
dsbC
Putative thiol:disulphide interchange protein (periplasmic); Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process (By similarity); Belongs to the thioredoxin family. DsbC subfamily.
  
    0.754
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
       0.611
BAV3228
Putative D-isomer specific 2-hydroxyacid dehydrogenase.
       0.597
gph-2
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
       0.562
BAV3002
Putative ribonuclease.
  
     0.532
gltB
Glutamate synthase [NADPH] large chain precursor.
      
 0.473
rlpA
Putative lipoprotein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
  
   
 0.446
mltD
Membrane-bound lytic murein transglycosylase D.
      
 0.438
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.