STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3249Putative gluconate dehydrogenase subunit. (251 aa)    
Predicted Functional Partners:
BAV3248
Putative gluconate dehydrogenase subunit.
 0.998
BAV3247
Putative cytochrome C subunit of gluconate dehydrogenase.
 
  
 0.935
purL
Phosphoribosylformylglycinamidine synthase; Start codon not provided; In the N-terminal section; belongs to the FGAMS family.
  
  
 0.862
adhB
Alcohol dehydrogenase cytochrome c subunit.
 
  
 0.782
BAV3403
Putative dehydrogenase, cytochrome C subunit.
 
  
 0.748
BAV1534
Putative bifunctional protein,oxidoreductase/cytochrome subunits.
 
  
 0.663
BAV2641
Putative capsular polysaccharide biosynthesis oxidoreductase.
 
 
 0.644
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.502
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
  
  
 0.428
purE
Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
  
    0.422
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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