STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAV3272Putative lipopolysaccharide core biosynthesis glycosyl transferase. (351 aa)    
Predicted Functional Partners:
rkpK
UDP-glucose 6-dehydrogenase.
  
  
 0.850
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
     
 0.734
wbpT
Putative O-antigen biosynthesis glycosyltransferase.
  
     0.713
waaG
Lipopolysaccharide core biosynthesis glycosyl protein; Also similar to BAV2238 (27.027 38d.).
  
     0.707
BAV3274
Putative transporter; Start codon not provided.
       0.651
BAV3276
Putative regulatory protein.
 
     0.624
wlbH
Putative glycosyl transferase.
  
     0.585
BAV0691
Putative membrane protein.
  
     0.573
BAV0476
Putative exported protein.
  
     0.531
waaE
Lipopolysaccharide core biosynthesis glycosyl transferase.
 
  
 0.528
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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