STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BAV3281Putative cytochrome oxidase assembly protein. (337 aa)    
Predicted Functional Partners:
cyoE
Protoheme IX farnesyltransferase (heme O synthase); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 0.999
BAV3279
Putative electron transport protein.
 
 0.923
ftsY
Cell division protein; Start codon not provided.
 
    0.903
petC
Cytochrome C.
 
 
 0.820
BAV1658
Putative electron transport protein.
 
 0.812
cyoB
Ubiquinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.717
coaBC
Coenzyme A biosynthesis bifunctional protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
     
 0.650
BAV3192
Putative cytochrome C; Truncated at N-terminus relative its orthologue in B. bronchiseptica.
 
     0.639
BAV1756
Putative cyclase.
    
  0.636
cyoA
Ubiquinol oxidase polypeptide II; Start codon not provided.
  
 
 0.607
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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