STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
adhCGlutathione-dependent formaldehyde dehydrogenase; Deleted EC_number 1.2.1.1; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (368 aa)    
Predicted Functional Partners:
BAV3288
Putative esterase; Serine hydrolase involved in the detoxification of formaldehyde.
 0.999
BAV0490
Probable alcohol dehydrogenase.
  
 
0.940
bphG
Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
     
 0.905
adhB
Alcohol dehydrogenase cytochrome c subunit.
     
 0.904
BAV3247
Putative cytochrome C subunit of gluconate dehydrogenase.
     
 0.904
BAV3287
Putative membrane protein; Start codon not provided.
       0.600
BAV3290
Conserved hypothetical protein.
       0.511
BAV1994
Putative zinc-binding cytidine/deoxycytidylate deaminase; Start codon not provided.
  
    0.484
gloA
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
 
  
 0.422
BAV3286
Putative exported protein.
       0.419
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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