BAV3340 protein (Bordetella avium) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

BAV3340

ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (576 aa)

Predicted Functional Partners:

BAV3339

0.885

BAV3338

0.842

BAV2197

0.660

BAV3337

0.630

BAV1078

0.628

BAV1562

0.586

BAV2540

0.573

BAV1848

0.527

BAV2802

0.517

BAV3204

0.512

Your Current Organism:

Bordetella avium

NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BAV1078	BAV3340	Putative cobalt ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.628
BAV1562	BAV3337	ABC transporter, permease protein.	ABC transporter, substrate-binding protein.	0.724
BAV1562	BAV3338	ABC transporter, permease protein.	ABC transporter, permease protein.	0.842
BAV1562	BAV3340	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.586
BAV1848	BAV3338	ABC transporter, permease protein.	ABC transporter, permease protein.	0.722
BAV1848	BAV3340	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.527
BAV2197	BAV3338	ABC transporter permease protein.	ABC transporter, permease protein.	0.689
BAV2197	BAV3340	ABC transporter permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.660
BAV2540	BAV3340	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.573
BAV2802	BAV3337	ABC transporter permease protein.	ABC transporter, substrate-binding protein.	0.823
BAV2802	BAV3338	ABC transporter permease protein.	ABC transporter, permease protein.	0.844
BAV2802	BAV3340	ABC transporter permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.517
BAV3204	BAV3337	ABC transporter, permease protein.	ABC transporter, substrate-binding protein.	0.700
BAV3204	BAV3338	ABC transporter, permease protein.	ABC transporter, permease protein.	0.833
BAV3204	BAV3340	ABC transporter, permease protein.	ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.	0.512
BAV3337	BAV1562	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.724
BAV3337	BAV2802	ABC transporter, substrate-binding protein.	ABC transporter permease protein.	0.823
BAV3337	BAV3204	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.700
BAV3337	BAV3338	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.919
BAV3337	BAV3339	ABC transporter, substrate-binding protein.	ABC transporter, permease protein.	0.917