STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3353LacI-family transcriptional regulator. (344 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase [NADPH] large chain precursor.
    
 
 0.893
ptsH
Phosphocarrier protein HPr.
 
 
 
 0.814
BAV3356
ABC transporter, permease protein.
 
   
 0.809
BAV3355
ABC transporter, permease protein.
 
     0.798
BAV3354
ABC transporter, substrate-binding protein.
 
   
 0.797
BAV3357
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
     
 0.758
cpdA-2
Putative phosphohydrolase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
   
 0.728
BAV0652
GntR-family transcriptional regulator.
  
   
 0.548
BAV3352
Putative amidase.
  
 
 0.548
BAV0945
GntR-family transcriptional regulator.
  
   
 0.503
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.