STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3355ABC transporter, permease protein. (269 aa)    
Predicted Functional Partners:
BAV3356
ABC transporter, permease protein.
 
 
  0.995
BAV3354
ABC transporter, substrate-binding protein.
 
  
  0.994
BAV3357
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
  0.992
modC
Molybdenum ABC transporter, ATP-binding protein.
 
  
 0.968
modA
Molybdenum ABC transporter, molybdate-binding periplasmic protein.
 
 
 0.940
cpdA-2
Putative phosphohydrolase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.907
BAV3353
LacI-family transcriptional regulator.
 
     0.800
BAV1556
Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
    0.799
cysI
Putative sulfite reductase.
  
  
 0.755
BAV1368
Antioxidant protein.
  
    0.567
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.