STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3360Conserved hypothetical protein. (113 aa)    
Predicted Functional Partners:
BAV3359
Hypothetical protein; No significant database matches. Seems to be unique to the bordetellae.
  
    0.856
BAV3276
Putative regulatory protein.
  
     0.754
BAV2282
Putative membrane protein.
  
     0.752
phaP
Granule-associated protein (phasin).
  
     0.735
BAV2759
Putative thioredoxin.
  
     0.726
BAV3116
Putative exported protein.
  
     0.691
BAV2520
Outer membrane porin protein.
  
     0.668
BAV0603
Putative outer membrane porin.
  
     0.641
BAV2758
Putative membrane protein.
  
     0.641
BAV1041
Outer membrane porin protein.
  
     0.630
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.