STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3368MerR-family transcriptional regulator. (126 aa)    
Predicted Functional Partners:
ivd
isovaleryl-CoA dehydrogenase.
 
    0.728
BAV3367
Metallo-beta-lactamase family protein.
 
   
 0.707
wlbJK
Putative membrane protein.
   
 
 0.567
bvgS
Virulence sensor protein; Start codon not provided.
   
 
 0.552
cbpA
Curved DNA-binding protein.
  
 
 0.524
BAV3370
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
    0.487
hmgcL
hydroxymethylglutaryl-CoA lyase.
 
  
 0.469
BAV3371
methylcrotonyl-CoA carboxylase beta chain.
  
  
 0.469
dnaJ
Chaperone protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK a [...]
 
 
 0.433
glnA
Glutamine synthetase.
  
 
 0.414
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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