STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3371methylcrotonyl-CoA carboxylase beta chain. (535 aa)    
Predicted Functional Partners:
BAV3372
methylcrotonyl-CoA carboxylase alpha chain; Start codon not provided.
 0.999
ivd
isovaleryl-CoA dehydrogenase.
 
 
 0.986
accC
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 0.951
BAV0226
acyl-CoA dehydrogenase.
  
 
 0.928
BAV0610
acyl-CoA dehydrogenase.
  
 
 0.928
BAV3021
acyl-CoA dehydrogenase.
  
 
 0.928
BAV0521
Hypothetical protein; No significant database matches.
  
 0.926
caiD
Carnitinyl-coa dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.926
BAV3222
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.926
BAV3199
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.925
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.