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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAV3372methylcrotonyl-CoA carboxylase alpha chain; Start codon not provided. (668 aa)    
Predicted Functional Partners:
BAV3371
methylcrotonyl-CoA carboxylase beta chain.
 0.999
ivd
isovaleryl-CoA dehydrogenase.
 
 0.960
caiD
Carnitinyl-coa dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.925
BAV3222
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.925
BAV3199
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.919
BAV0226
acyl-CoA dehydrogenase.
  
 0.916
BAV0610
acyl-CoA dehydrogenase.
  
 0.916
BAV3021
acyl-CoA dehydrogenase.
  
 0.916
BAV3297
Putative urea amidolyase-related protein; Also similar to BAV3097 (36.8 38d).
 
  
 0.909
BAV3298
Conserved hypothetical protein; Also similar to BAV3096 (28.6 38d).
 
    0.904
Your Current Organism:
Bordetella avium
NCBI taxonomy Id: 360910
Other names: B. avium 197N, Bordetella avium 197N, Bordetella avium str. 197N, Bordetella avium strain 197N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.