STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACQ69415.1KEGG: bcy:Bcer98_2113 hypothetical protein. (181 aa)    
Predicted Functional Partners:
ACQ69418.1
KEGG: bat:BAS3120 putative lipoprotein.
 
     0.906
ACQ69134.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A0854 oligopeptide transport system permease protein OppB.
 
  
 0.883
ACQ69135.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A2359 oligopeptide transport system permease protein OppC.
  
  
 0.845
ACQ69416.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pha:PSHAa2022 cysteine ABC transporter ATP-binding protein.
       0.773
ACQ69417.1
Hypothetical protein.
       0.773
ACQ69419.1
Hypothetical protein.
       0.773
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.773
ACQ69266.1
PFAM: cobalt transport protein; KEGG: bsu:BSU13210 hypothetical protein.
  
 
 0.698
ecfT
Cobalt transport protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.698
ACQ71023.1
PFAM: cobalt transport protein; KEGG: ppr:PBPRA2241 putative ABC transporter, membrane-spanning permease.
  
 
 0.698
Your Current Organism:
Exiguobacterium sp. AT1b
NCBI taxonomy Id: 360911
Other names: E. sp. AT1b
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.