Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACQ70924.1KEGG: bha:BH3319 hypothetical protein. (123 aa)    
Predicted Functional Partners:
ACQ70923.1
PFAM: LmbE family protein; KEGG: bha:BH3320 hypothetical protein.
 
    0.993
ACQ71727.1
KEGG: bca:BCE_3987 hypothetical protein.
  
     0.651
ACQ71728.1
PFAM: protein of unknown function DUF420; KEGG: sus:Acid_4378 hypothetical protein.
  
     0.649
ACQ70925.1
TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: bcy:Bcer98_3927 pyridoxal kinase.
       0.629
ACQ71726.1
PFAM: cytochrome C oxidase subunit IV; KEGG: bsu:BSU14920 cytochrome caa3 oxidase (subunit IV).
  
     0.610
ACQ70317.1
KEGG: bcy:Bcer98_3897 hypothetical protein.
  
     0.567
ACQ71673.1
PFAM: Phosphoesterase HXTX; KEGG: bcy:Bcer98_0945 hypothetical protein; Belongs to the 2H phosphoesterase superfamily. YjcG family.
  
     0.564
ACQ71263.1
PFAM: cytochrome c oxidase subunit I; KEGG: bha:BH0739 cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
     0.528
ACQ70220.1
KEGG: bha:BH3736 hypothetical protein.
  
     0.517
ACQ69822.1
PFAM: cytochrome c class I; KEGG: bsu:BSU35270 cytochrome c551.
  
     0.515
Your Current Organism:
Exiguobacterium sp. AT1b
NCBI taxonomy Id: 360911
Other names: E. sp. AT1b
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