STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACQ70971.1PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: bcu:BCAH820_0874 rhodanese domain family protein. (101 aa)    
Predicted Functional Partners:
ACQ70972.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SirA family protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: pca:Pcar_0429 uncharacterized NAD(FAD)-dependent dehydrogenase; Belongs to the sulfur carrier protein TusA family.
  
  
0.918
ACQ71449.1
PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: bcb:BCB4264_A3523 hydroxyacylglutathione hydrolase.
 
 
 0.516
ACQ69498.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.499
ACQ70970.1
PFAM: protein of unknown function DUF156; KEGG: bcu:BCAH820_0869 hypothetical protein.
       0.455
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.448
ACQ70973.1
TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bcb:BCB4264_A5206 sodium/alanine symporter family protein.
       0.448
rpsQ
Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
   0.415
Your Current Organism:
Exiguobacterium sp. AT1b
NCBI taxonomy Id: 360911
Other names: E. sp. AT1b
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