STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKB75855.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
KKB75850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
KKB75853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
KKB75852.1
2-dehydropantoate 2-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.699
KKB77187.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.608
KKB75851.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.593
KKB78400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.540
KKB75854.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.533
KKB78704.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.491
KKB75848.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
       0.490
dppD-2
DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.490
Your Current Organism:
Devosia soli
NCBI taxonomy Id: 361041
Other names: D. soli, DSM 17780, Devosia soli Yoo et al. 2006, KACC 11509, strain GH2-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.