STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLAC_07203Rab GTPase. (203 aa)    
Predicted Functional Partners:
DLAC_04324
Rab GTPase.
  
  
 
0.978
DLAC_02078
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
  0.978
DLAC_05237
Cytoplasmic dynein heavy chain.
    
  0.882
DLAC_01260
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.818
DLAC_03137
RING zinc finger-containing protein; Belongs to the VPS41 family.
    
 
 0.778
DLAC_01480
Uncharacterized protein; Belongs to the VPS16 family.
    
 
 0.778
DLAC_04896
7-fold repeat in clathrin and VPS proteins repeat-containing protein.
   
 
 0.777
DLAC_02573
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
    
 
 0.776
DLAC_10091
DUF254 family protein.
    
 0.726
DLAC_07987
Uncharacterized protein.
    
 0.721
Your Current Organism:
Tieghemostelium lacteum
NCBI taxonomy Id: 361077
Other names: Dictyostelium lacteum, T. lacteum
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