STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLAC_05701Putative RNA helicase of the SKI2 subfamily. (1432 aa)    
Predicted Functional Partners:
DLAC_00534
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.993
DLAC_09664
Nuclear pore protein.
   
 0.962
DLAC_07144
3'-5' exonuclease.
   
 0.910
DLAC_08860
Tetratricopeptide-like helical domain-containing protein (TPR).
   
 0.909
DLAC_06582
Exosome complex exonuclease RRP4.
   
 0.892
DLAC_02639
Putative exosome complex exonuclease.
   
 0.892
DLAC_06826
Uncharacterized protein.
   
 0.870
DLAC_06377
Uncharacterized protein.
   
 0.853
DLAC_04631
Putative nuclease.
   
 0.851
DLAC_07632
Uncharacterized protein.
   
 0.842
Your Current Organism:
Tieghemostelium lacteum
NCBI taxonomy Id: 361077
Other names: Dictyostelium lacteum, T. lacteum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.