STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLAC_03973RING-type domain-containing protein. (539 aa)    
Predicted Functional Partners:
DLAC_07368
Ubiquitin-protein ligase domain-containing protein.
   
 
 0.705
DLAC_02646
Ubiquitin/ribosomal protein S27a fusion protein.
    
 0.626
DLAC_05095
Metallophos_2 domain-containing protein.
   
  0.546
DLAC_00503
P/Homo B domain-containing protein.
   
  0.546
DLAC_11116
Putative ubiquitin-conjugating enzyme E2.
   
  0.508
DLAC_06622
Uncharacterized protein.
   
  0.504
DLAC_10526
Ubiquitin.
    
 0.496
DLAC_08291
Ubiquitin-like domain-containing protein.
    
 0.496
DLAC_11679
Ubiquitin-like domain-containing protein.
    
 0.496
DLAC_06972
Ubiquitin/ribosomal protein L40 fusion protein.
    
 0.496
Your Current Organism:
Tieghemostelium lacteum
NCBI taxonomy Id: 361077
Other names: Dictyostelium lacteum, T. lacteum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.