STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLAC_04163Putative SAM dependent methyltransferase. (281 aa)    
Predicted Functional Partners:
DLAC_02557
Farnesyl-diphosphate farnesyltransferase.
   
 0.652
DLAC_03527
C-8 sterol isomerase.
   
 0.614
DLAC_09296
Bms1-type G domain-containing protein.
   
  0.594
DLAC_00534
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.584
DLAC_08420
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.582
DLAC_09178
Cytochrome P450 family protein; Belongs to the cytochrome P450 family.
   
 0.581
DLAC_08036
S5 DRBM domain-containing protein.
    
 0.574
DLAC_06682
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 0.574
DLAC_08160
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.564
DLAC_03190
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.561
Your Current Organism:
Tieghemostelium lacteum
NCBI taxonomy Id: 361077
Other names: Dictyostelium lacteum, T. lacteum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.