STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLAC_03814SNF7 family protein. (211 aa)    
Predicted Functional Partners:
DLAC_06021
SNF7 family protein.
   
 0.999
DLAC_06384
SNF7 family protein.
  
  
 
0.988
DLAC_04259
SNF7 family protein.
   
0.976
DLAC_11080
SNF7 family protein.
   
 0.975
DLAC_09772
SNF7 family protein.
   
 0.942
DLAC_10682
Uncharacterized protein.
    
 0.904
DLAC_11689
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.904
DLAC_07502
IST1-like protein.
    
 0.884
DLAC_08849
Vacuolar protein sorting 36.
    
 0.857
DLAC_04080
Vacuolar protein sorting 25.
   
 0.852
Your Current Organism:
Tieghemostelium lacteum
NCBI taxonomy Id: 361077
Other names: Dictyostelium lacteum, T. lacteum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.