STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DLAC_03104Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family. (298 aa)    
Predicted Functional Partners:
DLAC_08395
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.992
DLAC_03718
Isopentenyl-diphosphate D-isomerase.
  
 
 0.991
DLAC_10384
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.989
DLAC_06969
Uncharacterized protein.
  
 
 0.989
DLAC_05344
Protein prenyltransferase alpha subunit.
     
 0.989
DLAC_00092
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.989
DLAC_02557
Farnesyl-diphosphate farnesyltransferase.
  
 0.954
DLAC_03149
Trans-prenyltransferase; Belongs to the FPP/GGPP synthase family.
     
 0.926
DLAC_08961
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.850
DLAC_02574
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
    
 0.850
Your Current Organism:
Tieghemostelium lacteum
NCBI taxonomy Id: 361077
Other names: Dictyostelium lacteum, T. lacteum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.