STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRPS_0599Unannotated protein. (308 aa)    
Predicted Functional Partners:
asp3
Unannotated protein.
   
 
 0.898
STRPS_1050
Unannotated protein.
     
 0.790
lrgB
Unannotated protein; Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses; Belongs to the CidB/LrgB family. LrgB subfamily.
       0.634
GCA_900102825_01022
Unannotated protein.
  
 
 
 0.617
lrgA
Unannotated protein.
       0.604
STRPS_0160
Unannotated protein.
    
 
 0.552
GCA_900102825_00619
Unannotated protein.
    
 
 0.552
gtfB
Unannotated protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. A stabilizing protein that is part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. The GtfA-GtfB complex adds GlcNAc from UDP-GlcNAc to the substrate protein, attaching the first sugar residue. Stabilizes the glycosylation activity of GtfA. Has no N-acetylglucosaminyl transferase activity on its own.
    
 
 0.552
GCA_900102825_00852
Unannotated protein.
    
 
 0.552
gtfA
Unannotated protein; Required for polymorphic O-glycosylation of the serine-rich repeat protein in this bacteria. Catalyzes the first step in glycosylation by transferring N-acetylglucosamine from UDP-GlcNAc to serine residues in the substrate protein. Part of the accessory SecA2/SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon.
    
 
 0.552
Your Current Organism:
Streptococcus pseudoporcinus
NCBI taxonomy Id: 361101
Other names: DSM 18513, NCTC 13786, S. pseudoporcinus, Streptococcus pseudoporcinus Bekal et al. 2007, strain LQ 940-04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.