STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrBUnannotated protein. (150 aa)    
Predicted Functional Partners:
msrA
Unannotated protein; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.989
STRPS_0664
Unannotated protein.
   
 0.903
rplT
Unannotated protein; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.826
STRPS_1984
Unannotated protein.
  
    0.800
STRPS_1299
Unannotated protein.
    
   0.787
rpsI
Unannotated protein; Belongs to the universal ribosomal protein uS9 family.
    
   0.787
rplU
Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
    
   0.787
rpmA
Unannotated protein; Belongs to the bacterial ribosomal protein bL27 family.
    
   0.787
rpsP
Unannotated protein; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.787
rpmB
Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family.
    
   0.787
Your Current Organism:
Streptococcus pseudoporcinus
NCBI taxonomy Id: 361101
Other names: DSM 18513, NCTC 13786, S. pseudoporcinus, Streptococcus pseudoporcinus Bekal et al. 2007, strain LQ 940-04
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.