STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRPS_1401Unannotated protein. (246 aa)    
Predicted Functional Partners:
lpdA_2
Unannotated protein.
  
 0.999
STRPS_1402
Unannotated protein.
 0.999
sun
Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.988
fmt
Unannotated protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
   0.913
dnaJ
Unannotated protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK [...]
  
   0.869
STRPS_1543
Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.846
STRPS_1363
Unannotated protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.830
gla
Unannotated protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.830
STRPS_1610
Unannotated protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.830
pdhB
Unannotated protein.
    
 0.803
Your Current Organism:
Streptococcus pseudoporcinus
NCBI taxonomy Id: 361101
Other names: DSM 18513, NCTC 13786, S. pseudoporcinus, Streptococcus pseudoporcinus Bekal et al. 2007, strain LQ 940-04
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.