Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALE15324.1tRNA-specific adenosine-34 deaminase. (165 aa)    
Predicted Functional Partners:
ALE15320.1
A glutathione-dependent thiol reductase; Belongs to the ArsC family.
     
 0.723
ALE15322.1
Ribosylnicotinamide kinase.
  
    0.721
ALE15323.1
Glycerophosphoryl diester phosphodiesterase.
       0.716
ALE15321.1
Ribosyl nicotinamide transporter, PnuC-like.
       0.714
hisE
Phosphoribosyl-ATP pyrophosphatase.
   
  
 0.588
ruvC
Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
     
 0.554
tdk
Thymidine kinase.
    
 0.534
ALE15318.1
Hypothetical protein.
  
  
 0.519
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.451
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.432
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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