Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALE16596.1Long-chain-fatty-acid--CoA ligase. (464 aa)    
Predicted Functional Partners:
ALE16595.1
Diaminopimelate decarboxylase.
 
  
 0.952
ALE16598.1
Hypothetical protein.
 
 
 0.923
ALE17482.1
Long-chain-fatty-acid--CoA ligase.
 
    
0.905
ALE16600.1
Esterase /lipase /thioesterase family active site.
 
     0.852
ALE16597.1
Hypothetical protein.
 
     0.687
ALE16587.1
Hypothetical protein.
 
     0.662
ALE16585.1
Eight transmembrane protein EpsH.
 
     0.661
ALE17649.1
Hypothetical protein.
 
     0.649
ALE16592.1
Lipopolysaccharide biosynthesis chain length determinant protein.
 
     0.630
ALE16303.1
Sensory transduction histidine kinase.
  
 
 
 0.606
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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