Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ALE16660.1Flp pilus assembly protein, pilin Flp. (57 aa)    
Predicted Functional Partners:
ALE16661.1
Flp pilus assembly protein, pilin Flp.
 
  
 
0.977
ALE16241.1
Hypothetical protein.
    
  0.905
ALE16240.1
Flp pilus assembly protein, pilin Flp.
  
  
 
0.902
ALE16853.1
Hypothetical protein.
     
  0.900
ALE17211.1
Type IV prepilin peptidase TadV /CpaA.
 
  
 0.605
ALE17215.1
Type II /IV secretion system ATPase TadZ /CpaE, associated with Flp pilus assembly.
 
  
 0.568
ALE17807.1
Hypothetical protein.
  
     0.539
ALE17212.1
Flp pilus assembly protein RcpC /CpaB.
 
  
 0.535
ALE16659.1
Hypothetical protein.
       0.529
ALE16854.1
Flp pilus assembly protein RcpC /CpaB.
 
  
 0.511
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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