STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE16696.1Gfa-like protein. (149 aa)    
Predicted Functional Partners:
ALE16697.1
Hypothetical protein.
       0.780
ALE16694.1
Hypothetical protein.
       0.777
ALE16695.1
Hydrolase.
       0.777
ALE16700.1
Inner membrane component of tripartite multidrug resistance system; Belongs to the major facilitator superfamily.
 
     0.626
ALE16693.1
Peptidyl-dipeptidase A precursor.
       0.585
ALE16698.1
Transcriptional regulator, MarR family.
       0.551
ALE16699.1
Membrane fusion component of tripartite multidrug resistance system.
       0.551
rimK
Ribosomal protein S6 glutaminyl transferase; Belongs to the RimK family.
  
    0.501
ALE16692.1
Hypothetical protein.
       0.499
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.