STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALE17482.1Long-chain-fatty-acid--CoA ligase. (584 aa)    
Predicted Functional Partners:
ALE17470.1
Siderophore biosynthesis non-ribosomal peptide synthetase module.
 
     0.940
ALE16596.1
Long-chain-fatty-acid--CoA ligase.
 
    
0.905
ALE18005.1
8-amino-7-oxononanoate synthase.
 
 0.776
ALE15630.1
Hypothetical protein.
  
     0.760
ALE17722.1
Hypothetical protein.
  
     0.738
ALE16576.1
CTP:Inositol-1-phosphate cytidylyltransferase.
  
     0.718
ALE17135.1
UDP-glucose 4-epimerase.
 
 
 0.715
ALE17481.1
Regulatory protein recX; Modulates RecA activity; Belongs to the RecX family.
 
   
 0.700
ALE16573.1
Hypothetical protein.
  
     0.698
ALE16574.1
CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
   
 0.694
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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