Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ALE17682.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
thrS
Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.835
ALE15395.1
IncF plasmid conjugative transfer pilus assembly protein TraE.
  
     0.562
ALE15533.1
Hypothetical protein.
  
     0.529
ALE15380.1
IncF plasmid conjugative transfer protein TraG.
  
     0.525
ALE16599.1
Hypothetical protein.
  
     0.494
ALE15387.1
Conjugative signal peptidase TrhF.
  
     0.480
ALE17684.1
Hypothetical protein.
       0.480
ALE15346.1
Chromosome (plasmid) partitioning protein ParB.
  
     0.459
ALE16941.1
Hypothetical protein.
  
     0.455
ALE17253.1
Negative transcriptional regulator.
  
     0.454
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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