Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ALE17726.1Beta-glucosidase. (795 aa)    
Predicted Functional Partners:
ALE17728.1
Ribose operon repressor.
 
   
 0.853
ALE17729.1
Tryptophan halogenase.
 
     0.828
ALE17730.1
Pass1-related protein.
 
     0.811
ALE17732.1
Tryptophan halogenase, putative.
 
     0.798
ALE17733.1
N-acetylglucosamine-regulated TonB-dependent outer membrane receptor.
 
   
 0.770
ALE17725.1
Fucose /glucose /galactose permease.
 
     0.740
ALE15764.1
Endo-1,4-beta-xylanase A precursor.
 
  
 0.730
ALE17731.1
Peptide transport system permease protein sapC.
 
     0.720
ALE17727.1
Membrane protein, probable.
 
   
 0.693
ALE15662.1
Transcriptional regulator.
 
   
 0.641
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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