Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ALE17746.1Response regulator of the LytR /AlgR family. (265 aa)    
Predicted Functional Partners:
ALE17745.1
Autolysin sensor kinase.
 
 
 0.979
ALE17795.1
Two-component signal transduction histidine kinase.
 
  
 0.859
ALE17747.1
Quinolinate phosphoribosyltransferase; Belongs to the NadC/ModD family.
       0.647
ALE17744.1
Metal-dependent phosphohydrolase, HD subdomain.
       0.644
ALE17749.1
Ribonuclease T2 family protein; Belongs to the RNase T2 family.
 
     0.519
ALE16116.1
Membrane protein, putative.
  
     0.497
ALE18006.1
Hypothetical protein.
  
   
 0.483
ALE15822.1
Sensor histidine kinase.
     
 0.429
ALE16386.1
Transcriptional regulator.
  
     0.421
ALE17748.1
Hypothetical protein.
       0.417
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
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