Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ALE17752.1Hypothetical protein. (330 aa)    
Predicted Functional Partners:
ALE17753.1
Peptidase.
       0.727
ALE17754.1
Exodeoxyribonuclease VII small subunit.
 
     0.715
ALE17773.1
Transcriptional regulator, AraC family.
  
     0.573
xseA
Phosphoribosylamine--glycine ligase; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.543
ALE17774.1
Transcriptional regulator, AraC family.
  
     0.475
ALE15881.1
Hypothetical protein.
  
     0.469
purD
Exodeoxyribonuclease VII large subunit; Belongs to the GARS family.
       0.432
ALE16628.1
Hypothetical protein.
  
     0.423
ALE16912.1
Hypothetical protein.
  
     0.415
ALE17130.1
Hypothetical protein.
  
     0.412
Your Current Organism:
Altererythrobacter epoxidivorans
NCBI taxonomy Id: 361183
Other names: A. epoxidivorans, Altererythrobacter epoxidivorans Kwon et al. 2007, JCM 13815, KCCM 42314, strain JCS350
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.